The joint Ruminomics/RMG Network workshop was held in Dublin, Ireland on 22nd June 2013. The workshop was divided into a morning session with several presentations describing techniques associated with ruminal microbiome and metagenome analysis. The post-lunch session provided updates on the activities of the RMG Network and the underpinning Global Rumen Census and Hungate 1000 projects. The final session provided an opportunity to cover areas of interest such as culturing, taxonomy and the future role for the RMG Network.
Session 1. Harmonisation of techniques associated with ruminal microbiome and metagenome analysis.
| Introduction to Ruminomics | John Wallace, UK  ruminomics_intro_dublin_wallace.pdf (0.55MB) |
| Sampling and sample storage | Gemma Henderson, NZ and Ilma Tapio, Finland ruminomics_sample storage_dublin_henderson.pdf(1.59MB) |
| Existing and emerging sequencing technologies | Mick Watson, UK Ruminomics_sequencing_technologies_Dublin_Watso...(0.78MB) |
| Microbiome analysis | Leluo Guan, Canada and Sinead Waters, Ireland ruminomics_microbiome... (0.51MB) |
| Metagenome analysis and community structure | Stewart Denman, Australia ruminomics_metagenome_dublin_Denman.pdf (3.89MB) |
| Genomics | Sinead Leahy, NZ Ruminomics_Genomics_Dublin_Leahy.pdf (1.18MB) |
| Functional metagenomics | Graeme Attwood, NZ ruminomics_functional...(1.69MB) |
| Metatranscriptomics | Chris Creevey, Ireland Ruminomics_Metatranscriptomics_Dublin_Creevey.pdf(2.47MB) |
| Metaproteomics | Tim Snelling, UK ruminomics_metaproteomics_dublin_snelling.pdf(1.59MB) |
| Bioinformatics for metagenomic sequence analysis | John Williams, Italy ruminomics_bioinformatics_dublin_williams.pdf (2.91MB) |
| The origins and objectives of the Rumen Microbial Genomics Network | Adrian Cookson, NZ ruminomics_network presentation_dublin_cookson.pdf (0.70MB) |
| Global census of rumen microbial diversity | Gemma Henderson, NZ ruminomics_global rumen... (0.63MB) |
| The Hungate 1000: a catalogue of reference genomes from the rumen microbiome | Bill Kelly, NZ ruminomics_hungate1000_dublin_kelly.pdf (0.70MB) |
ruminomics_WorkshopOverview_dublin_wallace.pdf (0.31MB)